CCMB

The People

Swasti Raychaudhuri

Swasti Raychaudhuri

Principal Scientist
+91-040-27192558
rcswasti@ccmb.res.in

Research Interests

Toxic and beneficial outcome of protein aggregation inside cells

With the increasing life expectancy, developing effective treatments for numerous degenerative, age-related diseases becomes of enormous medical, social and economic relevance. Hence, research on cellular and organismal aging is now the focus of several leading laboratories and has provided different hypotheses about the causes of aging. One prominent hypothesis suggests that a gradual, age-dependent decline of protein homeostasis (proteostasis) accompanied by increasing protein-aggregation is the underlying cause of many age-related loss-of-function diseases. In our lab we perform systemic analysis of protein-aggregation in age-related proteostasis stress models. We are interested to identify the response of the cellular proteome against the newly triggered aggregates due to various stresses. Simultaneously, we investigate how components of the proteostasis network, including molecular chaperones, degradation machinery and others collaborate to maintain the integrity of the proteome in the face of protein-aggregation stresses. The specific questions include:

Proteostatic control on protein-complex biogenesis!!
Cellular response to protein aggregation!!
We use modern cell biology and state-of-the-art proteomics arsenal to address our questions.

Selected Publications

Widespread Nuclear Lamina injuries defeat proteostatic purposes of ?-Synuclein amyloid Inclusions. Mansuri S, Jain A, Singh R, Rawat S, Mondal D, Raychaudhuri S. J Cell Sci. 2024; doi: 10.1242/jcs.261935. Online ahead of print.

Increased supraorganization of respiratory complexes is a dynamic multistep remodelling in response to proteostasis stress. Rawat S, Ghosh S, Mondal D, Anusha V, Raychaudhuri S. J Cell Sci. 2020;133(18):jcs248492. doi: 10.1242/jcs.248492.

Aggregation of Respiratory Complex Subunits Marks the Onset of Proteotoxicity in Proteasome Inhibited Cells. Rawat S, Anusha V, Jha M, Sreedurgalakshmi K, Raychaudhuri S. J Mol Biol. 2019; 431(5):996-1015.

Interplay of Acetyltransferase EP300 and the Proteasome System in Regulating Heat Shock Transcription Factor 1. Raychaudhuri S, Loew C, Koerner R, Pinkert S, Theis M, Hayer-Hartl M, Buchholz F, Hartl FU. Cell. 2014; 156(5):975-85.

Firefly luciferase mutants as sensors of proteome stress. Gupta R, Kasturi P, Bracher A, Loew C, Zheng M, Villella A, Garza D, Hartl FU, Raychaudhuri S. Nature Methods. 2011; 8(10):879-84.

Education & Experience

P.G:

Biotechnology ; University of Calcutta ; 2002

Ph.D:

Biophysical and Biological characterization of Huntingtin Interacting Protein HYPK ; University of Calcutta ; 2008

Post.Doc:

Protein misfolding, Stress response ; Max Planck Institute for Biochemistry ; 2008-2013

Team Members

team-members-pic
Pooja Gupta
Pooja Gupta

Senior Research Fellow

Senior Research Fellow

Suparna Ghosh
Suparna Ghosh

Junior Research Fellow

Junior Research Fellow

Anchal
Anchal

Junior Research Fellow

Junior Research Fellow

Pallavi Rao T
Pallavi Rao T

Junior Research Fellow

Junior Research Fellow

Sristi Chakroborty
Sristi Chakroborty

Junior Research Fellow (Project)

Junior Research Fellow (Project)

Neha kumari
Neha kumari

Junior Research Fellow (project)

Junior Research Fellow (project)

Shreya Tripathi
Shreya Tripathi

Junior Research Fellow (project)

Junior Research Fellow (project)

Gururaj kalshetti
Gururaj kalshetti

Junior Research Fellow (Project)

Junior Research Fellow (Project)

Abhishek Aher
Abhishek Aher

Project Research Scientist - I

Project Research Scientist - I

Bhavika Advani
Bhavika Advani

Junior Research Fellow (project)

Junior Research Fellow (project)

Publications

Title

Journal

Year

Enhanced Secretion of Promyogenic Exosomes by Quiescent Muscle Cells
Frontiers in Cell and Developmental Biology
2024
Cell membrane proteome analysis in HEK293T cells challenged with α-Synuclein amyloids.
J Biosciences.
2024
TEX13B is essential for metabolic reprogramming during germ cell differentiation.
Human Reproduction
2024
Widespread Nuclear Lamina injuries defeat proteostatic purposes of α-Synuclein amyloid Inclusions.
Journal of Cell Science
2024
Rapid and Deep Plasma Proteomics workflows for robust identification and quantification of biomarkers of Sickle Cell Anaemia
Journal of Proteins and Proteomics
2022
Stress Responses Elicited by Misfolded Proteins Targeted to Mitochondria.
J Mol Bio
2022
Increased supraorganization of respiratory complexes is a dynamic multistep remodelling in response to proteostasis stress.
J Cell Science
2020
Aggregation of Respiratory Complex Subunits Marks the Onset of Proteotoxicity in Proteasome Inhibited Cells
J Mol Biol
2019
Cytoplasmic sequestration of the RhoA effector mDiaphanous1 by Prohibitin2 promotes muscle differentiation.
Scientific Reports
2019
Identification of a splice variant of optineurin which is defective in autophagy and phosphorylation
Biochim Biophys Acta Mol Cell Res.
2018
Firefly luciferase mutants as sensors of proteome stress
Nature Methods
2011
Interplay of Acetyltransferase EP300 and the Proteasome System in Regulating Heat Shock Transcription Factor 1
Cell
2014
Conserved C-terminal nascent peptide binding domain of HYPK facilitates its chaperone-like activity
Journal of Biosciences
2014
Protein Folding in the Cytoplasm and the Heat Shock Response
Cold Spring Harb Perspect Biol
2010
Identification of HYPK interacting proteins reveals involvement of HYPK in regulating cell growth, cell cycle, unfolded protein response and cell death
PLoS One
2009
HYPK, a Huntingtin interacting protein, reduces aggregates and apoptosis induced by N-terminal Huntingtin with 40 glutamines in Neuro2a cells and exhibits chaperone-like activity
Hum Mol Genet
2008
Huntingtin interacting protein HYPK is intrinsically unstructured
Proteins
2008
Bacterial exotoxins downregulate cathelicidin (hCAP-18/LL-37) and human beta-defensin 1 (HBD-1) expression in the intestinal epithelial cells
Cell Microbiol
2008
Increased caspase-2, calpain activations and decreased mitochondrial complex II activity in cells expressing exogenous huntingtin exon 1 containing CAG repeat in the pathogenic range
Cell Mol Neurobiol
2007
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